Gsea autophagy

Author: fdcz

August undefined, 2024

WebAug 13, 2024 · Autophagy has been associated with oncogenesis with one of its emerging key functions being its contribution to the metabolism of tumors. ... GSEA was performed using GSEA v3.0 tool developed by ... WebGene set enrichment analysis (GSEA) To uncover the hidden functions of the feature genes, GSEA software (version 4.4.3) was used. Analyzes were conducted on two subsets of the Molecular Signatures Database (MSigDB), c5.go.bp.v7.4.symbols.gmt for GO and c2.cp.kegg.v7.4.symbols.gmt for KEGG. ... In support of our findings, the autophagy ...

A seven-autophagy-related long non-coding RNA signature IJGM

Web36 rows · Human Gene Set: KEGG_REGULATION_OF_AUTOPHAGY. Standard name. KEGG_REGULATION_OF_AUTOPHAGY. Systematic name. M6382. Brief description. … WebCompendia expression profiles ?: GTEx compendium Human tissue compendium (Novartis) Global Cancer Map (Broad Institute) NCI-60 cell lines (National Cancer Institute): Advanced query: Further investigate these 30 genes : Gene families ?: Categorize these 30 genes by gene family : Show members (show 30 members mapped to 30 genes) twin frozr 7 driver

Full article: Effect of interfering TOR signaling pathway on the ...

WebNov 12, 2024 · GSEA can analyze the probe identifiers or collapse each probe set to a gene vector, where the gene is identified by gene symbol. Collapsing the probe sets prevents … WebSep 2, 2024 · The coexpression network of lncRNAs and autophagy-related genes was utilized to select autophagy-related lncRNAs. The lncRNAs were further screened using univariate Cox regression. In addition, Lasso regression and multivariate Cox regression were used to develop an autophagy-related lncRNA signature. WebDec 7, 2024 · Autophagy, a highly conserved cellular proteolysis process, has been involved in non-small cell lung cancer (NSCLC). We tried to develop a prognostic … tailwise login

Identifying and Validating of an Autophagy-Related Gene …

NR3C1/Glucocorticoid receptor activation promotes pancreatic β …

WebHuman Gene Set: REACTOME_CHAPERONE_MEDIATED_AUTOPHAGY. Standard name. REACTOME_CHAPERONE_MEDIATED_AUTOPHAGY. Systematic name. M27937. Brief description. Chaperone Mediated Autophagy. Full … WebNational Center for Biotechnology Information tailwins rewardsWebMar 23, 2024 · Optineurin (OPTN) is a conserved protein that has been identified as an autophagy receptor and plays a central role in selective autophagy. It has been reported that OPTN, as a receptor, is generally recruited into ubiquitin-coated depolarized mitochondria and has been shown to be a major molecule necessary for mitophagy ( … tailwings uk

"WebDec 17, 2024 · Keywords: GSEA; autophagy; gene signature; glioblastoma; prognostic model. Publication types MeSH terms Autophagy / genetics Autophagy / physiology* Databases, Genetic Gene Expression Regulation, Neoplastic Genetic Testing* Glioblastoma / metabolism* Glioblastoma / pathology* Humans Nomograms* Prognosis Reproducibility … " - Gsea autophagy

Gsea autophagy

WP_CLOCKCONTROLLED_AUTOPHAGY_IN_BONE_METABOLISM - gsea …

Web研究还没思路？. 带你快速了解非肿瘤疾病国自然热点—自噬. 自噬是近年来国自然研究的热点，因此自噬相关的文章就会好发表一些。. 很多小伙伴想要研究自噬，但是却苦苦想不出来好的思路，那自噬怎么研究呢？. 今天小云就给大家分享一篇干湿结合非肿瘤 ... WebFeb 16, 2024 · The risk score model based on the autophagy-related signature showed favorable predicting value in 1-, 2-, and 3-year relapse-free survival (RFS) in training and …

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WebJan 8, 2024 · The autophagy gene list was obtained from human autophagy database . The gene candidates in this database have been reported to directly or indirectly involve in autophagy. Through a GSEA, autophagy was found to be significantly enriched in the high-DDIT4-expression group (Fig. 6A). WebApr 12, 2024 · Terms such as autophagy (GO:0006914) process utilizing autophagic mechanism (GO:0061919), positive regulation of autophagy (GO:0010508), and autophagosome assembly (GO:0000045) were suppressed in GSEA (Fig. 3A). These results suggest that thrombin may reduce cholesterol efflux by affecting lipid hydrolysis …

WebFor the Mouse gene set with the same name, see GOBP_SELECTIVE_AUTOPHAGY. Standard name. GOBP_SELECTIVE_AUTOPHAGY. Systematic name. M24317. Brief description. The macroautophagy process in which specific structures are targeted by the autophagy process. [PMID:20484971, PMID:21997368, PMID:22966490] WebOct 14, 2024 · b Autophagy-related pathways based on GSEA REACTOME analysis using the same data as in (a). FDR and NES are presented as a bar graph (NES >1.25, FDR <0.25). FDR and NES are presented as a bar ...

WebThe GSEA analysis results show that ribosomal biological processes and photosynthesis-related pathways are obviously enriched in the three stages, and photosynthesis-related pathways are the main biological processes with down-regulation in the three stages. ... Besides, we discovered that the autophagy and the RNA degradation process was ... WebStandard name. WP_CLOCKCONTROLLED_AUTOPHAGY_IN_BONE_METABOLISM. Systematic name. M45523. Brief description. Clock-controlled autophagy in bone metabolism. Full description or abstract. Collection. C2: Curated.

WebCompendia expression profiles ?: GTEx compendium Human tissue compendium (Novartis) Global Cancer Map (Broad Institute) NCI-60 cell lines (National Cancer Institute): …

WebGSEA is listed in the World's largest and most authoritative dictionary database of abbreviations and acronyms GSEA - What does GSEA stand for? The Free Dictionary tailwins signature flight supportWebGene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically. significant, concordant differences … twin frozr 7850WebMay 1, 2024 · GSEA suggested that autophagy was enhanced in ovarian cancer cells under lnc-CTSLP8 overexpression (Fig. 3a). TEM revealed greater numbers of enlarged … twin frozr cooler boost softwareWebThe seven autophagy-related signatures predicted the OS of patients with RCC correctly, exhibiting a significant potential for clinical applications, including custom prediction and treatment. A study of GSEA enhancements showed substantial variations between risky and low-risk groups considering the autophagic signal pathways. twinfst cabinetWebMay 1, 2024 · Gene Set Enrichment Analysis (GSEA) was used for gene function annotation. Single-cell RNA-sequencing Fresh ovarian cancer tissue, adjacent ovarian tissue, and peritoneal metastasis tissue samples were cut into small pieces and then enzymatically digested using the MACS tumor dissociation kit (Miltenyi Biotec, Germany). tailwiondWebApr 11, 2024 · The GEO30122 dataset was examined using GSEA to characterize the functional genome associated with diabetic nephropathy. Finally, a total of 226 datasets met the FDR Q value <0.25 and the p. adjust value <0.05. We selected 14 of these pathways that met NES ≥ 2.0 and the adjusted p-value < 0.05 for GSEA enrichment analysis to be … twin fryer commercial tailwin table